Watch: Marvel's Agents of SHIELD Clip References Captain America: Civil War
If I'm not mistaken, the Sokovia Accords have more to do with The Avengers coming under the control of the U.N., than the following clip suggesting it has to do with every super powered individual registering with the U.S. govt. (which is the comic book version).
I guess it's not that big of a deal as Marvel TV is not connected to Marvel Studios.
It probably also should be noted the Inhumans movie looks to be not happening, which was another Marvel TV idea as well.
Agents of SHIELD airs Tuesdays on ABC.